STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604550Hexosyltransferase. (571 aa)    
Predicted Functional Partners:
LOC106605320
Brevican core protein-like isoform X1.
     
 0.600
LOC106580754
Aggrecan core protein-like isoform X2.
     
 0.600
chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.597
miga1
Protein FAM73A isoform X2.
      
 0.587
LOC106592094
Carbohydrate sulfotransferase 15-like.
      
 0.585
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
    
 
 0.574
extl2
Exostosin-like 2.
    
 
 0.528
LOC106564018
Carbohydrate sulfotransferase.
      
 0.510
chst12
Carbohydrate sulfotransferase.
      
 0.510
LOC106562767
Carbohydrate sulfotransferase 15-like.
      
 0.495
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.