STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1065996241-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. (1132 aa)    
Predicted Functional Partners:
LOC106570392
Endothelin-1-like.
     
 0.693
LOC106589028
Uncharacterized protein LOC106589028.
     
 0.693
LOC106580086
Guanine nucleotide-binding protein G(Q) subunit alpha-like.
    
 0.689
LOC106580085
Guanine nucleotide-binding protein subunit alpha-14-like.
    
 0.689
LOC106613802
Guanine nucleotide-binding protein subunit alpha-11 isoform X2.
    
 0.689
GNA14
Guanine nucleotide-binding protein subunit alpha-14-like.
    
 0.689
LOC106585689
Guanine nucleotide-binding protein G(q) subunit alpha.
    
 0.689
LOC106584406
Guanine nucleotide-binding protein subunit alpha-11-like isoform X3.
    
 0.689
LOC106574495
Guanine nucleotide-binding protein subunit alpha-11-like isoform X2.
    
 0.689
LOC106574495-2
Guanine nucleotide-binding protein subunit alpha-11-like.
    
 0.689
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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