STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609833Ninjurin-2-like. (129 aa)    
Predicted Functional Partners:
LOC106609604
Leucine-rich repeat and guanylate kinase domain-containing protein-like.
      
 0.594
cep41
Centrosomal protein of 41 kDa isoform X1.
      
 0.593
LOC106576568
Urocortin-3-like.
      
 0.468
LOC106593864
Urocortin-3-like.
      
 0.468
PSD8
26S proteasome non-ATPase regulatory subunit 8.
      
 0.420
LOC106604327
SLAIN motif-containing protein-like isoform X1.
      
 0.416
ENSSSAP00000082818
annotation not available
      
 0.416
ENSSSAP00000113746
annotation not available
      
 0.416
LOC106590288
V-set and transmembrane domain-containing protein 2A-like.
      
 0.404
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.