STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106593636Solute carrier family 35 member F4-like isoform X1. (464 aa)    
Predicted Functional Partners:
LOC106581208
Probable ATP-dependent RNA helicase DHX40.
      
 0.590
LOC106570059
Transmembrane protein C9orf91 homolog isoform X2.
      
 0.511
LOC106588519
Transmembrane protein C9orf91 homolog isoform X1.
      
 0.511
gpr19
Probable G-protein coupled receptor 19.
      
 0.483
proc
Vitamin K-dependent protein C.
      
 0.438
LOC106601683
Ankyrin repeat domain-containing protein 40-like.
      
 0.436
LOC106606725
Ankyrin repeat domain-containing protein 40-like.
      
 0.436
LOC106593603
Tetraspanin.
      
 0.412
ENSSSAP00000021918
annotation not available
      
 0.412
TSN18
Tetraspanin.
      
 0.412
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.