Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000010841annotation not available (181 aa)    
Predicted Functional Partners:
smim20
Small integral membrane protein 20.
   
  
 0.706
ENSSSAP00000016192
Zinc finger DHHC-type containing 22.
      
 0.698
zdhhc24
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.668
zdhhc6
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.626
LOC106611327
Vacuolar protein 8-like isoform X1.
      
 0.626
chch8
Coiled-coil-helix-coiled-coil-helix domain-containing protein 8 isoform X1.
      
 0.573
LOC106563642
Cytochrome c oxidase assembly factor 4 homolog, mitochondrial-like.
      
 0.573
fbx42
F-box only protein 42 isoform X1.
      
 0.554
ENSSSAP00000031065
23S rRNA (uridine2552-2'-O)-methyltransferase.
      
 0.554
LOC106577585
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.554
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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