STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGPPhosphoglycolate phosphatase. (292 aa)    
Predicted Functional Partners:
armt1
Protein-glutamate O-methyltransferase.
   
  
 0.554
xylb
Xylulose kinase isoform X1.
  
  
 0.548
psat1
Phosphoserine aminotransferase.
  
 
 0.544
ENSSSAP00000018219
Kynurenine 3-monooxygenase.
      
 0.541
LOC106576798
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid.
      
 0.541
pgls
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 
 0.516
gk5
Putative glycerol kinase 5; Belongs to the FGGY kinase family.
  
  
 0.510
ECHDC1
ethylmalonyl-CoA decarboxylase-like; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  
 0.504
rnls
Renalase isoform X2.
      
 0.499
LOC106565907
Pantothenate kinase.
   
  
 0.498
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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