SCARF2 protein (Salmo salar) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SCARF2

Scavenger receptor class F member 2-like isoform X1. (897 aa)

Predicted Functional Partners:

NPC1L1

0.555

LOC100534606

0.553

acp1

0.503

s10ae

0.495

cd59

0.473

LOC106603307

0.466

tnfrsf13b

0.432

LOC106589221

0.432

LOC106570815

0.430

LOC100136449

0.430

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100136449	LOC106570815	ENSSSAP00000047024	ENSSSAP00000042105	Interleukin-1.	Interleukin-1.	0.901
LOC100136449	SCARF2	ENSSSAP00000047024	ENSSSAP00000010868	Interleukin-1.	Scavenger receptor class F member 2-like isoform X1.	0.430
LOC100534606	NPC1L1	ENSSSAP00000108350	ENSSSAP00000085874	SCARB1-like protein 2 isoform X4; Belongs to the CD36 family.	Niemann-Pick C1-like protein 1.	0.515
LOC100534606	SCARF2	ENSSSAP00000108350	ENSSSAP00000010868	SCARB1-like protein 2 isoform X4; Belongs to the CD36 family.	Scavenger receptor class F member 2-like isoform X1.	0.553
LOC106570815	LOC100136449	ENSSSAP00000042105	ENSSSAP00000047024	Interleukin-1.	Interleukin-1.	0.901
LOC106570815	SCARF2	ENSSSAP00000042105	ENSSSAP00000010868	Interleukin-1.	Scavenger receptor class F member 2-like isoform X1.	0.430
LOC106589221	SCARF2	ENSSSAP00000113482	ENSSSAP00000010868	Tumor necrosis factor receptor superfamily member 13B-like.	Scavenger receptor class F member 2-like isoform X1.	0.432
LOC106589221	tnfrsf13b	ENSSSAP00000113482	ENSSSAP00000075542	Tumor necrosis factor receptor superfamily member 13B-like.	Tumor necrosis factor receptor superfamily member 13B isoform X1.	0.901
LOC106603307	SCARF2	ENSSSAP00000084970	ENSSSAP00000010868	Relaxin receptor 1-like isoform X1.	Scavenger receptor class F member 2-like isoform X1.	0.466
NPC1L1	LOC100534606	ENSSSAP00000085874	ENSSSAP00000108350	Niemann-Pick C1-like protein 1.	SCARB1-like protein 2 isoform X4; Belongs to the CD36 family.	0.515
NPC1L1	SCARF2	ENSSSAP00000085874	ENSSSAP00000010868	Niemann-Pick C1-like protein 1.	Scavenger receptor class F member 2-like isoform X1.	0.555
NPC1L1	acp1	ENSSSAP00000085874	ENSSSAP00000030428	Niemann-Pick C1-like protein 1.	Low molecular weight phosphotyrosine protein phosphatase isoform X1.	0.497
SCARF2	LOC100136449	ENSSSAP00000010868	ENSSSAP00000047024	Scavenger receptor class F member 2-like isoform X1.	Interleukin-1.	0.430
SCARF2	LOC100534606	ENSSSAP00000010868	ENSSSAP00000108350	Scavenger receptor class F member 2-like isoform X1.	SCARB1-like protein 2 isoform X4; Belongs to the CD36 family.	0.553
SCARF2	LOC106570815	ENSSSAP00000010868	ENSSSAP00000042105	Scavenger receptor class F member 2-like isoform X1.	Interleukin-1.	0.430
SCARF2	LOC106589221	ENSSSAP00000010868	ENSSSAP00000113482	Scavenger receptor class F member 2-like isoform X1.	Tumor necrosis factor receptor superfamily member 13B-like.	0.432
SCARF2	LOC106603307	ENSSSAP00000010868	ENSSSAP00000084970	Scavenger receptor class F member 2-like isoform X1.	Relaxin receptor 1-like isoform X1.	0.466
SCARF2	NPC1L1	ENSSSAP00000010868	ENSSSAP00000085874	Scavenger receptor class F member 2-like isoform X1.	Niemann-Pick C1-like protein 1.	0.555
SCARF2	acp1	ENSSSAP00000010868	ENSSSAP00000030428	Scavenger receptor class F member 2-like isoform X1.	Low molecular weight phosphotyrosine protein phosphatase isoform X1.	0.503
SCARF2	cd59	ENSSSAP00000010868	ENSSSAP00000115225	Scavenger receptor class F member 2-like isoform X1.	CD59 glycoprotein.	0.473