STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609704BRICHOS domain-containing protein 5-like isoform X2. (234 aa)    
Predicted Functional Partners:
LOC106581734
Anterior gradient protein 3 homolog.
      
 0.601
LOC106586124
Anterior gradient protein 3 homolog.
      
 0.601
tectb
Beta-tectorin.
      
 0.601
PCDH20
Protocadherin-20-like isoform X1.
      
 0.599
zpld1
Zona pellucida-like domain-containing protein 1, secreted form; Glycoprotein which is a component of the gelatinous extracellular matrix in the cupulae of the vestibular organ.
      
 0.596
LOC106581142
Zona pellucida-like domain-containing protein 1.
      
 0.596
LOC106613048
Zona pellucida-like domain-containing protein 1 isoform X1.
      
 0.596
LOC106592728
Acylpyruvase FAHD1, mitochondrial-like.
      
 0.487
fahd1
Fumarylacetoacetate hydrolase domain-containing protein 1.
      
 0.487
LOC106592728-2
Acylpyruvase FAHD1, mitochondrial-like.
      
 0.487
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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