STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608811Perforin-1-like isoform X1. (606 aa)    
Predicted Functional Partners:
ENSSSAP00000042731
annotation not available
   
  
 0.802
LOC100136450
CD8 alpha precursor.
   
  
 0.802
LOC106610706
Antimicrobial peptide NK-lysin-like.
   
  
 0.739
nkl
Antimicrobial peptide NK-lysin precursor.
   
  
 0.739
LOC106561598
Antimicrobial peptide NK-lysin-like.
   
  
 0.739
LOC106564129
Uncharacterized protein LOC106564129.
   
  
 0.739
ENSSSAP00000019348
annotation not available
   
  
 0.739
LOC106613961
Tumor necrosis factor ligand superfamily member 6-like; Belongs to the tumor necrosis factor family.
   
 0.737
TNFL6
Tumor necrosis factor ligand superfamily member 6; Belongs to the tumor necrosis factor family.
   
 0.737
C1QC-2
Complement C1q subcomponent subunit C-like.
   
 0.686
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.