STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10660579428S ribosomal protein S29, mitochondrial-like. (267 aa)    
Predicted Functional Partners:
mrps10
28S ribosomal protein S10, mitochondrial.
   
 0.985
mrps27
28S ribosomal protein S27, mitochondrial.
   
 0.985
mrps18b
28S ribosomal protein S18b, mitochondrial.
   
 0.983
LOC106577161
28S ribosomal protein S5, mitochondrial-like.
   
 0.982
LOC106608355
28S ribosomal protein S5, mitochondrial-like; Belongs to the universal ribosomal protein uS5 family.
   
 0.982
mrps25
28S ribosomal protein S25, mitochondrial.
   
 0.981
mrps11
28S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family.
   
 0.979
ptcd3
LOW QUALITY PROTEIN: pentatricopeptide repeat domain-containing protein 3, mitochondrial.
   
 0.979
LOC106574616
28S ribosomal protein S9, mitochondrial-like.
   
 0.973
ENSSSAP00000107517
annotation not available
   
 0.973
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.