Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hgfaHepatocyte growth factor activator. (609 aa)    
Predicted Functional Partners:
LOC106609962
Plasma protease C1 inhibitor-like; Belongs to the serpin family.
   
 0.937
LOC106602690
Plasma protease C1 inhibitor-like; Belongs to the serpin family.
   
 0.937
LOC106610865
Kunitz-type protease inhibitor 1-like.
    
 0.881
spit1
Kunitz-type protease inhibitor 1 precursor.
    
 0.881
ENSSSAP00000028674
annotation not available
    
 0.881
LOC106571141
Kunitz-type protease inhibitor 1-like isoform X1.
    
 0.881
LOC106565756
Macrophage-stimulating protein receptor-like.
    
 0.869
LOC106573120
Hepatocyte growth factor receptor-like.
    
 0.869
LOC106582756
Macrophage-stimulating protein receptor-like.
    
 0.869
LOC106561553
Hepatocyte growth factor receptor-like.
    
 0.869
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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