STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
meiobMeiosis-specific with OB domain-containing protein isoform X1. (464 aa)    
Predicted Functional Partners:
wrn
Werner syndrome ATP-dependent helicase isoform X2.
    
 0.999
ENSSSAP00000042990
annotation not available
    
 0.999
rad52
DNA repair protein RAD52 homolog.
    
 0.980
DNA2
DNA replication ATP-dependent helicase/nuclease DNA2.
    
 0.979
rpa3
Replication protein A3.
   
 0.966
LOC106570310
Replication protein A 14 kDa subunit-like.
   
 0.966
ENSSSAP00000025751
annotation not available
   
 0.965
ercc4
DNA repair endonuclease XPF.
    
 0.954
atr
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
    
 0.943
ENSSSAP00000103411
annotation not available
    
 0.943
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.