STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608812Endonuclease domain-containing 1 protein-like. (303 aa)    
Predicted Functional Partners:
MSL3
Male-specific lethal 3 homolog isoform X1.
    
 0.759
msl2
Male-specific lethal 2-like 1.
    
 0.583
LOC106590518
E3 ubiquitin-protein ligase MSL2-like.
    
 0.583
ENSSSAP00000028539
annotation not available
   
  0.534
ENSSSAP00000024395
annotation not available
   
  0.527
ENSSSAP00000086728
annotation not available
   
  0.527
ENSSSAP00000092802
annotation not available
   
  0.527
ENSSSAP00000103215
annotation not available
   
  0.527
wdr90
WD repeat-containing protein 90.
   
 0.484
slf1
Ankyrin repeat domain-containing protein 32 isoform X1.
   
 0.459
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.