STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NU107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (631 aa)    
Predicted Functional Partners:
LOC106564728
Nuclear pore complex protein Nup133-like.
   
 0.999
ENSSSAP00000025737
annotation not available
   
 0.999
nup54
Nucleoporin p54.
   
 0.999
ENSSSAP00000028410
annotation not available
   
 0.999
seh1l
Nucleoporin SEH1 isoform X4; Belongs to the WD repeat SEC13 family.
   
 0.999
LOC106582182
E3 SUMO-protein ligase RanBP2-like isoform X4.
   
 0.999
LOC106586530
E3 SUMO-protein ligase RanBP2-like isoform X1.
   
 0.999
LOC106594566
Nucleoporin SEH1 isoform X1; Belongs to the WD repeat SEC13 family.
   
 0.999
NUP214
Nuclear pore complex protein Nup214-like isoform X2.
   
 0.999
LOC106587472
Nuclear pore complex protein Nup133-like.
   
 0.999
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.