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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clptm1Cleft lip and palate transmembrane protein 1. (660 aa)    
Predicted Functional Partners:
md2l1
Mitotic spindle assembly checkpoint protein MAD2A.
    
   0.587
LOC106577502
Mitotic spindle assembly checkpoint protein MAD2A-like.
    
   0.587
LOC106581782
Coiled-coil domain-containing protein 89-like.
      
 0.580
LOC106594579
Mitotic spindle assembly checkpoint protein MAD1-like.
    
   0.575
LOC106595452
Mitotic spindle assembly checkpoint protein MAD1-like.
    
   0.575
ddx11
Probable ATP-dependent RNA helicase DDX11 isoform X1.
    
 
 0.536
LOC106593828
Translocation protein SEC63 homolog isoform X2.
   
  
 0.467
LOC106613668
Nicalin-1-like isoform X1.
   
  
 0.454
LOC106573831
Nicalin-1 isoform X1.
   
  
 0.454
gmppb
Mannose-1-phosphate guanyltransferase beta.
   
  
 0.452
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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