STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106565785PHD finger protein 20-like isoform X4. (1044 aa)    
Predicted Functional Partners:
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.952
mcrs1
Microspherule protein 1.
   
 0.945
LOC106583247
Microspherule protein 1-like.
   
 0.945
LOC106579846
KAT8 regulatory NSL complex subunit 3-like isoform X2.
    
 0.907
LOC106585595
KAT8 regulatory NSL complex subunit 3-like isoform X1.
    
 0.907
LOC106607458
KAT8 regulatory NSL complex subunit 1-like isoform X1.
    
 0.827
kansl1l
KAT8 regulatory NSL complex subunit 1-like protein isoform X1.
    
 0.827
LOC106600871
KAT8 regulatory NSL complex subunit 1-like isoform X2.
    
 0.827
LOC106579123
KAT8 regulatory NSL complex subunit 1-like isoform X1.
    
 0.827
LOC106563227
WD repeat-containing protein 5.
    
 0.817
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.