STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106598669Solute carrier family 35 member E3. (272 aa)    
Predicted Functional Partners:
LOC106566455
Solute carrier family 35 member C2-like.
      
 0.543
ENSSSAP00000023159
annotation not available
   
    0.468
cssa16h15orf40
UPF0235 protein C15orf40 homolog.
   
    0.468
DCXR
L-xylulose reductase isoform X1.
      
 0.465
SLC35C1
Solute carrier family 35 member C1.
      
 0.461
LOC106562569
GDP-fucose transporter 1-like isoform X1.
      
 0.461
NU107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.447
abtb2
Ankyrin repeat and BTB/POZ domain-containing protein 2 isoform X1.
      
 0.445
slc35f3
Putative thiamine transporter SLC35F3 isoform X2.
      
 0.443
TGDS
TDP-glucose 4,6-dehydratase.
   
 
 0.437
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.