Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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LOC106561567Eukaryotic translation initiation factor 4 gamma 2-like. (952 aa)    
Predicted Functional Partners:
ncbp2
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.943
nbp1a
Nuclear cap-binding protein subunit 1; Component of the cap-binding complex (CBC), which binds cotranscriptionally to the 5'-cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense-mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5'-end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U sn [...]
   
 0.936
NCBP1
Nuclear cap-binding protein subunit 1-like isoform X1.
   
 0.936
LOC106560692
Eukaryotic initiation factor 4A-I-like.
   
 0.903
LOC106577905
Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family.
   
 0.903
LOC106602896
Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family.
   
 0.903
LOC106563639
Eukaryotic translation initiation factor 4E-1B-like isoform X1; Belongs to the eukaryotic initiation factor 4E family.
   
 0.901
eif4e1a
Eukaryotic translation initiation factor 4E-1A; Belongs to the eukaryotic initiation factor 4E family.
   
 0.896
IF4EA
Eukaryotic translation initiation factor 4E-1A; Belongs to the eukaryotic initiation factor 4E family.
   
 0.896
LOC106604514
Eukaryotic Translation initiation factor 4E-1A; Belongs to the eukaryotic initiation factor 4E family.
   
 0.896
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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