STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561567Eukaryotic translation initiation factor 4 gamma 2-like. (952 aa)    
Predicted Functional Partners:
LOC106577905
Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family.
   
 0.988
LOC106602896
Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family.
   
 0.988
eif4e1a
Eukaryotic translation initiation factor 4E-1A; Belongs to the eukaryotic initiation factor 4E family.
   
 0.938
LOC106563639
Eukaryotic translation initiation factor 4E-1B-like isoform X1; Belongs to the eukaryotic initiation factor 4E family.
   
 0.938
LOC106604514
Eukaryotic Translation initiation factor 4E-1A; Belongs to the eukaryotic initiation factor 4E family.
   
 0.938
if4e
Eukaryotic translation initiation factor 4E isoform X1; Belongs to the eukaryotic initiation factor 4E family.
   
 0.933
LOC106577251
Eukaryotic translation initiation factor 4E-like isoform X1; Belongs to the eukaryotic initiation factor 4E family.
   
 0.933
LOC106560692
Eukaryotic initiation factor 4A-I-like.
   
 0.891
ncbp2
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.885
nbp1a
Nuclear cap-binding protein subunit 1; Component of the cap-binding complex (CBC), which binds cotranscriptionally to the 5'-cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense-mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5'-end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U sn [...]
   
 0.835
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.