Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TKTTransketolase-like. (643 aa)    
Predicted Functional Partners:
ENSSSAP00000087422
Transaldolase 1.
  
 0.981
ENSSSAP00000075662
annotation not available
  
 0.976
taldo
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.976
LOC106582040
Ribulose-phosphate 3-epimerase-like.
  
 0.942
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.942
LOC100196671
Beta-enolase; Belongs to the enolase family.
   
 0.940
eno4
Enolase-like protein ENO4 isoform X1.
   
 0.930
rbm45
RNA-binding protein 45.
  
 
 0.919
LOC106565995
GDH/6PGL endoplasmic bifunctional protein-like.
  
 0.919
LOC106582765
GDH/6PGL endoplasmic bifunctional protein-like.
  
 0.919
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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