STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603494Polypeptide N-acetylgalactosaminyltransferase. (609 aa)    
Predicted Functional Partners:
LOC106611522
C1GALT1-specific chaperone 1-like.
     
 0.714
LOC106565526
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like.
     
 0.705
LOC106567039
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like isoform X1.
     
 0.705
ENSSSAP00000091692
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like.
     
 0.705
LOC106606712
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.
     
 0.681
LOC106588683
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.
     
 0.681
LOC106570288
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X1.
     
 0.681
LOC106570212
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like; Belongs to the glycosyltransferase 29 family.
     
 0.667
LOC106589847
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like; Belongs to the glycosyltransferase 29 family.
     
 0.667
LOC106610172
Polypeptide N-acetylgalactosaminyltransferase.
  
0.526
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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