STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tisbButyrate response factor 1. (364 aa)    
Predicted Functional Partners:
exosc8
Exosome complex component RRP43.
   
  0.854
dcp2
m7GpppN-mRNA hydrolase isoform X1.
   
 0.788
LOC106599575
5'-3' exoribonuclease 1.
    
 0.766
LOC106568870
5'-3' exoribonuclease 1.
    
 0.766
LOC106605081
Centrosomal protein of 85 kDa-like isoform X1.
    
 
 0.725
LOC106571383
Centrosomal protein of 85 kDa-like.
      
 0.723
LOC106607781
Centrosomal protein of 85 kDa-like isoform X4.
      
 0.723
exosc1
Exosome complex component CSL4 isoform X1.
     
 0.691
LOC106561350
CCR4-NOT transcription complex subunit 1-like isoform X11.
   
 
 0.687
ier2
Immediate early response gene 2 protein.
   
  
 0.685
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.