STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000011331annotation not available (215 aa)    
Predicted Functional Partners:
LOC106608275
Zinc finger CCCH domain-containing protein 14-like isoform X3.
    
 
 0.730
ENSSSAP00000044310
annotation not available
    
 
 0.730
ENSSSAP00000028410
annotation not available
   
 
 0.683
ipo5
Importin-5.
   
 
 0.682
LOC106579624
Importin-4-like isoform X2.
   
 
 0.682
ipo4
Importin-4.
   
 
 0.682
exosc7
Exosome complex exonuclease RRP42.
   
 
  0.667
exosc8
Exosome complex component RRP43.
   
 
  0.666
exosc1
Exosome complex component CSL4 isoform X1.
   
 
  0.660
exosc5
Exosome complex component RRP46 isoform X1.
   
 
 0.659
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.