STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOCKCircadian locomoter output cycles protein kaput-like isoform X4. (888 aa)    
Predicted Functional Partners:
LOC106611029
CLOCK-interacting pacemaker-like.
    
 
 0.859
LOC106598206
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
   
0.848
LOC106609509
Aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1.
   
0.848
LOC106573213
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
   
0.848
LOC106561420
Aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1.
   
0.848
LOC106561455
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.
   
0.848
LOC106562106
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
   
0.848
LOC106587199
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
   
0.848
LOC106608520
Period circadian protein homolog 1-like isoform X1.
    
0.810
LOC106563389
Period circadian protein homolog 1-like isoform X1.
    
0.810
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (36%) [HD]