STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIC1RAB6A-GEF complex partner protein 1. (1442 aa)    
Predicted Functional Partners:
ENSSSAP00000025709
GP1 homolog, RAB6A GEF complex partner 1.
    
 0.975
rgp1-2
RAB6A-GEF complex partner protein 2.
    
 0.975
COG8
Conserved oligomeric Golgi complex subunit 8-like.
   
 0.936
rab6a
Ras-related protein Rab-6A isoform X2.
    
 0.886
LOC106568768
Ras-related protein Rab-6B-like.
    
 0.886
LOC106603351
Ras-related protein Rab-6A-like isoform X4.
    
 0.886
LOC106598876
Ras-related protein Rab-6B-like isoform X1.
    
 0.886
rab6c
Ras-related protein Rab-6A-like isoform X3.
    
 0.886
ENSSSAP00000083648
Ras-related protein Rab-6B.
    
 0.886
LOC106604734
Ras-related protein Rab-6A-like.
    
 0.886
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.