STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106562605Glutamine and serine-rich protein 1-like. (1587 aa)    
Predicted Functional Partners:
topaz1
Testis- and ovary-specific PAZ domain-containing protein 1 isoform X1.
      
 0.524
LOC106612364
Protein IWS1 homolog isoform X1.
      
 0.468
LOC106580633
Protein IWS1 homolog isoform X4.
      
 0.468
ddx52
Probable ATP-dependent RNA helicase DDX52 isoform X1.
      
 0.467
LOC106565654
Dual serine/threonine and tyrosine protein kinase-like isoform X1.
      
 0.449
LOC106583092
Dual serine/threonine and tyrosine protein kinase.
      
 0.449
proser1
Proline and serine-rich protein 1.
      
 0.444
ENSSSAP00000042558
Beta-1,4-glucuronyltransferase 1.
   
  
 0.422
b4gat1
Beta-1,4-glucuronyltransferase 1.
   
  
 0.422
tmtc3
Transmembrane and TPR repeat-containing protein 3.
   
 
 0.417
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.