Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561004E3 ubiquitin-protein ligase RFWD3-like. (1072 aa)    
Predicted Functional Partners:
ENSSSAP00000022335
annotation not available
    
 0.769
ENSSSAP00000065590
annotation not available
    
 0.769
ENSSSAP00000065612
annotation not available
    
 0.769
ENSSSAP00000080045
annotation not available
    
 0.769
LOC106560653
L-selectin-like.
    
 0.769
LOC106560647
E-selectin-like.
    
 0.769
LOC106592820
E-selectin-like.
    
 0.769
ENSSSAP00000080881
annotation not available
    
 0.769
OSBPL8
Oxysterol-binding protein; Belongs to the OSBP family.
    
   0.760
LOC106560704
Oxysterol-binding protein; Belongs to the OSBP family.
    
   0.760
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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