Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106603097Voltage-gated potassium channel subunit beta-3-like isoform X4. (415 aa)    
Predicted Functional Partners:
NU107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.808
LOC106611134
Potassium voltage-gated channel subfamily F member 1-like; Belongs to the potassium channel family.
   
 0.765
KCNF1
Potassium voltage-gated channel subfamily F member 1-like; Belongs to the potassium channel family.
   
 0.765
LOC106564728
Nuclear pore complex protein Nup133-like.
   
 0.755
LOC106587472
Nuclear pore complex protein Nup133-like.
   
 0.755
LOC106568504
Cell cycle and apoptosis regulator protein 2-like.
    
   0.732
LOC106608528
Potassium voltage-gated channel subfamily H member 1-like.
    
 0.712
LOC106585074
Potassium voltage-gated channel subfamily H member 1-like isoform X2.
    
 0.712
LOC106599078
Potassium voltage-gated channel subfamily H member 5-like isoform X2.
    
 0.712
LOC106610918
Potassium voltage-gated channel subfamily H member 5-like.
    
 0.712
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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