STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
t120aTransmembrane protein 120A isoform X1. (357 aa)    
Predicted Functional Partners:
LOC106607901
CSC1-like protein 1.
      
 0.601
LOC106608622
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
      
 0.581
ENSSSAP00000010346
MAX dimerization protein MLX.
      
 0.576
LOC106607319
Max-like protein X.
      
 0.576
LOC100194657
Transmembrane protein 38A-2.
      
 0.571
TMEM38A
Transmembrane protein 38A-1.
      
 0.571
rhof
Rho-related GTP-binding protein RhoF isoform X1.
      
 0.412
LOC106568222
Rho-related GTP-binding protein RhoF-like isoform X1.
      
 0.412
dtl
Denticleless protein homolog.
      
 0.410
DTL
Denticleless protein homolog isoform X1.
      
 0.410
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.