STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000011426annotation not available (364 aa)    
Predicted Functional Partners:
gosr1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.791
LOC106589265-2
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
 
 0.652
LOC106567038
Golgin subfamily A member 2-like isoform X1.
   
 
 0.647
golga2
Golgin subfamily A member 2 isoform X1.
   
 
 0.647
LOC106608030
Golgi resident protein GCP60-like isoform X2.
    
 0.601
ACBD3
Golgi resident protein GCP60-like.
    
 0.601
stx5
Syntaxin-5 isoform X1; Belongs to the syntaxin family.
    
 0.600
LOC106604387
Syntaxin-5-like; Belongs to the syntaxin family.
    
 0.600
STX5
Syntaxin-5-like; Belongs to the syntaxin family.
    
 0.600
ENSSSAP00000087136
annotation not available
    
 0.600
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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