Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSSAP00000011458Proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane). (262 aa)    
Predicted Functional Partners:
LOC106562216
E3 ubiquitin-protein ligase NEDD4-like isoform X1.
    
 
 0.656
nedd4l
E3 ubiquitin-protein ligase NEDD4-like isoform X1.
    
 
 0.656
NEDD4
E3 ubiquitin-protein ligase NEDD4-like.
    
 
 0.656
LOC106560594
WW domain-containing transcription regulator protein 1-like isoform X2.
    
   0.604
LOC106613407
Transcriptional coactivator YAP1-like.
    
   0.604
LOC106581582
Transcriptional coactivator YAP1-like.
    
   0.604
LOC106583953
WW domain-containing transcription regulator protein 1-like isoform X2.
    
   0.604
cep41
Centrosomal protein of 41 kDa isoform X1.
      
 0.574
LOC106572977
Transcription initiation factor TFIID subunit 2.
      
 0.572
ENSSSAP00000009776
annotation not available
      
 0.467
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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