STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSMB6Proteasome subunit beta. (231 aa)    
Predicted Functional Partners:
psma5
Proteasome subunit alpha type.
   
 0.999
LOC106588338
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.998
LOC106569904
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.998
psmb1
Proteasome subunit beta.
   
 0.997
LOC106564948
Proteasome subunit beta type-3-like.
   
0.997
LOC106587952
Proteasome subunit beta.
   
0.997
PSMB1
Proteasome subunit beta.
   
 0.997
psma3
Proteasome subunit alpha type.
   
 0.996
LOC106569939
Proteasome subunit beta.
   
0.996
psmb2
20S proteasome subunit beta 4.
   
 0.996
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.