Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSSSAP00000011522annotation not available (67 aa)    
Predicted Functional Partners:
LOC106582056
EF-hand domain-containing family member B-like isoform X2.
   
 
 0.768
efhc2
EF-hand domain-containing family member C2 isoform X1.
   
 
 0.761
lrrc34
Leucine-rich repeat-containing protein 34.
   
 
 0.719
ccdc96
Coiled-coil domain-containing protein 96.
   
  0.708
ccdc39
Coiled-coil domain-containing protein 39.
   
 
 0.690
ccdc65
Coiled-coil domain-containing protein 65.
   
 
 0.686
efhc1
EF-hand domain-containing protein 1 isoform X1.
   
 
 0.668
ENSSSAP00000025086
EF-hand calcium binding domain 1.
    
 
 0.637
efcab1
EF-hand calcium-binding domain-containing protein 1.
    
 
 0.637
dnajb13
dnaJ homolog subfamily B member 13.
    
 0.631
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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