STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COPS6COP9 signalosome complex subunit 6. (328 aa)    
Predicted Functional Partners:
LOC106581673
COP9 signalosome complex subunit 8 isoform X1.
   
 0.998
LOC106579522
COP9 constitutive photomorphogenic homolog subunit 5.
   
 0.995
cops5
COP9 signalosome complex subunit 5.
   
 0.995
LOC106562268
COP9 signalosome complex subunit 4 isoform X1.
   
 0.994
csn8
COP9 signalosome complex subunit 8.
   
 0.991
cops3
COP9 signalosome complex subunit 3.
   
 0.989
csn4
Salmo salar COP9 signalosome complex subunit 4 (csn4), mRNA.
   
 0.988
csn1
COP9 signalosome complex subunit 1.
   
 0.982
COPS7B
COP9 signalosome complex subunit 7b-like.
   
 0.981
csn7a
COP9 signalosome complex subunit 7a.
   
 0.981
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.