STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAPBBeta-soluble NSF attachment protein-like isoform X1. (319 aa)    
Predicted Functional Partners:
LOC106579024
Vesicle transport through interaction with t-SNAREs homolog 1A-like isoform X1.
    
 0.952
LOC106589328
Vesicle transport through interaction with t-SNAREs homolog 1A-like isoform X4.
    
 0.952
LOC106611206
Sec1 family domain-containing protein 1-like; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.940
scfd1
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.940
LOC106585118
Vesicle-associated membrane protein 8-like isoform X1.
    
 0.930
gosr1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.917
stx16
Syntaxin-16 isoform X2; Belongs to the syntaxin family.
    
 0.910
LOC106565427
Syntaxin-16-like isoform X2; Belongs to the syntaxin family.
    
 0.910
vamp3
Vesicle-associated membrane protein 3.
   
 0.904
use1
Vesicle transport protein USE1.
    
 0.894
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.