STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106570112Pygopus homolog 2-like isoform X2. (543 aa)    
Predicted Functional Partners:
lef1
Lymphoid enhancer-binding factor 1 isoform X5.
     
 0.859
LOC106575079
B-cell CLL/lymphoma 9 protein-like.
    
 0.851
LOC106574308
B-cell CLL/lymphoma 9 protein-like isoform X1.
    
 0.851
BCL9
B-cell CLL/lymphoma 9 protein-like.
    
 0.817
ctnnb1
Catenin beta-1.
    
 0.810
mysm1
Histone H2A deubiquitinase MYSM1.
   
 0.793
LOC106613979
Histone H2A deubiquitinase MYSM1-like.
   
 0.793
acl6b
Actin-like protein 6B isoform X1; Belongs to the actin family.
    
 0.775
LOC106574142
Actin-like protein 6B; Belongs to the actin family.
    
 0.775
LOC106570179
Aquaporin-10-like; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.726
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.