STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106569375Myeloid-associated differentiation marker homolog. (292 aa)    
Predicted Functional Partners:
cop1
E3 ubiquitin-protein ligase RFWD2 isoform X1.
      
 0.810
ENSSSAP00000020977
Phosphatidylinositol glycan anchor biosynthesis, class B.
      
 0.748
pigb
Mannosyltransferase.
      
 0.748
LOC106609345
Carbohydrate sulfotransferase.
   
  
 0.742
xrcc3
DNA repair protein XRCC3.
      
 0.660
CHST11
Carbohydrate sulfotransferase.
   
  
 0.652
ddb2
DNA damage-binding protein 2.
      
 0.650
RAD23B
UV excision repair protein RAD23 homolog B-like isoform X1.
      
 0.648
pllp
Plasmolipin.
      
 0.451
hdlbp
Vigilin isoform X2.
      
 0.426
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.