STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bod1l1Biorientation of chromosomes in cell division protein 1-like 1. (181 aa)    
Predicted Functional Partners:
LOC106570060
Sialidase-1-like.
  
 0.728
LOC106588520
Sialidase-1-like.
  
 0.728
LOC106587401
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.597
ENSSSAP00000028981
annotation not available
   
 0.597
LOC106562245
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.597
ctsa
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.597
ENSSSAP00000116387
annotation not available
   
 0.597
LOC106584865
Stomatin-like protein 1.
      
 0.533
ENSSSAP00000037019
annotation not available
   
 
 0.530
LOC106581489
Sialidase-4-like.
   
 
 0.530
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.