Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bach1Transcription regulator protein BACH1. (160 aa)    
Predicted Functional Partners:
LOC106601120
Transcription factor MafK-like.
    
 0.936
LOC106607337
Transcription factor MafK-like.
    
 0.936
fbxl17
F-box/LRR-repeat protein 17 isoform X1.
    
  0.890
ENSSSAP00000101946
annotation not available
    
  0.890
LOC106592261
Transcription factor MafG-like.
    
 0.846
ENSSSAP00000017565
annotation not available
    
 0.846
rbx1
RING-box protein 1; E3 ubiquitin ligase component of multiple cullin-RING-based E3 ubiquitin-protein ligase (CRLs) complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins, including proteins involved in cell cycle progression, signal transduction, transcription and transcription-coupled nucleotide excision repair. CRLs complexes and arih1 collaborate in tandem to mediate ubiquitination of target proteins, arih1 mediating addition of the first ubiquitin on CRLs targets. The functional specificity of the E3 ubiquitin-protein ligase complexes d [...]
   
 0.767
ENSSSAP00000071155
annotation not available
   
 0.767
rbx1-2
Salmo salar ring-box 1 (rbx1), mRNA.
   
 0.767
LOC106601927
Transcription factor MafG-like.
    
 0.749
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (14%) [HD]