STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nkx3-2Homeobox protein Nkx-3.2. (276 aa)    
Predicted Functional Partners:
LOC106602386
Heart- and neural crest derivatives-expressed protein 2-like.
    
 
 0.503
LOC106610171
Scrapie-responsive protein 1-like.
    
 
 0.503
LOC106583841
Homeobox protein BarH-like 1.
   
  
0.495
LOC106566281
Homeobox protein BarH-like 1.
   
  
0.495
LOC106599911
Forkhead box protein F2-like.
   
 
 0.451
LOC106560371
Forkhead box protein F2-like.
   
 
 0.451
LOC106584076
Forkhead box protein F2-like.
   
 
 0.451
LOC106562281
Forkhead box protein F1-like.
   
 
 0.451
foxf1
Forkhead box protein F1.
   
 
 0.451
foxf2
Forkhead box protein F2.
   
 
 0.451
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.