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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106570109pre-B-cell leukemia transcription factor-interacting protein 1-like isoform X2. (841 aa)    
Predicted Functional Partners:
ENSSSAP00000039965
Guanylate kinase-like.
      
 0.457
LOC106613532
MAGUK p55 subfamily member 5-like isoform X3.
      
 0.457
LOC106611696
FERM and PDZ domain-containing protein 1-like isoform X2.
  
     0.448
arf1
Guanylate kinase isoform X1.
      
 0.444
kgua
Guanylate kinase isoform X1.
      
 0.444
LOC106567501
Protein Shroom1-like isoform X1.
  
     0.437
LOC106603850
Protein Shroom3-like isoform X1.
  
     0.406
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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