STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106570109pre-B-cell leukemia transcription factor-interacting protein 1-like isoform X2. (841 aa)    
Predicted Functional Partners:
ENSSSAP00000039965
Guanylate kinase-like.
      
 0.591
LOC106613532
MAGUK p55 subfamily member 5-like isoform X3.
      
 0.591
arf1
Guanylate kinase isoform X1.
      
 0.583
kgua
Guanylate kinase isoform X1.
      
 0.583
LOC106611696
FERM and PDZ domain-containing protein 1-like isoform X2.
  
     0.448
LOC106567501
Protein Shroom1-like isoform X1.
  
     0.437
mpeg1
Macrophage-expressed gene 1 protein.
      
 0.425
LOC106603850
Protein Shroom3-like isoform X1.
  
     0.406
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.