Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106563906Cell adhesion molecule 2-like. (287 aa)    
Predicted Functional Partners:
ENSSSAP00000012526
annotation not available
     
 0.816
pvrl1
Nectin-1.
     
 0.816
fank1
Fibronectin type 3 and ankyrin repeat domains protein 1 isoform X1.
      
 0.806
LOC106611899
Wolframin-like isoform X2.
      
 0.720
LOC106604863
Wolframin-like.
      
 0.720
LOC106573336
Cytosolic carboxypeptidase 2-like isoform X3.
      
 0.717
rapsn
43 kDa receptor-associated protein of the synapse isoform X1.
      
 0.715
LOC106582653
Potassium voltage-gated channel subfamily S member 2-like; Belongs to the potassium channel family.
      
 0.706
LOC106563524
Zinc transporter ZIP13-like isoform X1.
      
 0.703
ttc36
Tetratricopeptide repeat protein 36.
      
 0.701
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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