STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561000Nuclear transcription factor Y subunit beta. (207 aa)    
Predicted Functional Partners:
LOC106588897
Nuclear transcription factor Y subunit gamma-like isoform X2.
   
 0.971
nfyc
Nuclear transcription factor Y subunit gamma isoform X1.
   
 0.971
LOC106583083
Nuclear transcription factor Y subunit alpha-like isoform X1.
   
 0.965
LOC106566364
Nuclear transcription factor Y subunit alpha-like isoform X1.
   
 0.965
nfya
Nuclear transcription factor Y subunit alpha.
   
 0.965
chrc1
Chromatin accessibility complex protein 1.
   
 0.950
LOC106588921
Chromatin accessibility complex protein 1-like.
   
 0.948
LOC106600475
Uncharacterized protein LOC106600475.
   
 0.863
ENSSSAP00000075289
annotation not available
   
 0.863
LOC106561707
5'-nucleotidase domain-containing protein 3-like.
      
 0.652
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.