ENSSSAP00000011697 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSSAP00000011697

annotation not available (133 aa)

Predicted Functional Partners:

LOC106609726

0.964

LOC106563948

0.927

LOC106568180

0.927

smad4

0.927

SMAD4

0.927

ctnnb1

0.922

LOC106579553

0.917

LOC106590409

0.917

LOC106606173

0.914

sp1

0.908

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000011697	LOC106563948	ENSSSAP00000011697	ENSSSAP00000001454	annotation not available	Mothers against decapentaplegic homolog.	0.927
ENSSSAP00000011697	LOC106568180	ENSSSAP00000011697	ENSSSAP00000070778	annotation not available	Mothers against decapentaplegic homolog.	0.927
ENSSSAP00000011697	LOC106579553	ENSSSAP00000011697	ENSSSAP00000088589	annotation not available	Forkhead box protein H1-like isoform X2.	0.917
ENSSSAP00000011697	LOC106590409	ENSSSAP00000011697	ENSSSAP00000116732	annotation not available	Forkhead box protein H1-like.	0.917
ENSSSAP00000011697	LOC106606173	ENSSSAP00000011697	ENSSSAP00000005902	annotation not available	TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...]	0.914
ENSSSAP00000011697	LOC106609726	ENSSSAP00000011697	ENSSSAP00000013698	annotation not available	Inner nuclear membrane protein Man1-like.	0.964
ENSSSAP00000011697	SMAD4	ENSSSAP00000011697	ENSSSAP00000104615	annotation not available	Mothers against decapentaplegic homolog.	0.927
ENSSSAP00000011697	ctnnb1	ENSSSAP00000011697	ENSSSAP00000038398	annotation not available	Catenin beta-1.	0.922
ENSSSAP00000011697	smad4	ENSSSAP00000011697	ENSSSAP00000101532	annotation not available	Mothers against decapentaplegic homolog.	0.927
ENSSSAP00000011697	sp1	ENSSSAP00000011697	ENSSSAP00000011689	annotation not available	Transcription factor Sp1 isoform X2.	0.908
LOC106563948	ENSSSAP00000011697	ENSSSAP00000001454	ENSSSAP00000011697	Mothers against decapentaplegic homolog.	annotation not available	0.927
LOC106563948	LOC106568180	ENSSSAP00000001454	ENSSSAP00000070778	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.543
LOC106563948	LOC106579553	ENSSSAP00000001454	ENSSSAP00000088589	Mothers against decapentaplegic homolog.	Forkhead box protein H1-like isoform X2.	0.675
LOC106563948	LOC106590409	ENSSSAP00000001454	ENSSSAP00000116732	Mothers against decapentaplegic homolog.	Forkhead box protein H1-like.	0.675
LOC106563948	LOC106606173	ENSSSAP00000001454	ENSSSAP00000005902	Mothers against decapentaplegic homolog.	TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...]	0.797
LOC106563948	LOC106609726	ENSSSAP00000001454	ENSSSAP00000013698	Mothers against decapentaplegic homolog.	Inner nuclear membrane protein Man1-like.	0.478
LOC106563948	SMAD4	ENSSSAP00000001454	ENSSSAP00000104615	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.929
LOC106563948	ctnnb1	ENSSSAP00000001454	ENSSSAP00000038398	Mothers against decapentaplegic homolog.	Catenin beta-1.	0.736
LOC106563948	smad4	ENSSSAP00000001454	ENSSSAP00000101532	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.929
LOC106563948	sp1	ENSSSAP00000001454	ENSSSAP00000011689	Mothers against decapentaplegic homolog.	Transcription factor Sp1 isoform X2.	0.917