STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564172Retinol dehydrogenase 8-like. (472 aa)    
Predicted Functional Partners:
ENSSSAP00000008244
Retinal dehydrogenase 2-like.
  
 0.746
LOC106562207
Retinal dehydrogenase 2-like.
  
 0.746
LOC106592019
Aldehyde dehydrogenase family 1 member A3-like.
  
 0.746
ALDH1A1
Retinal dehydrogenase 1-like isoform X1; Belongs to the aldehyde dehydrogenase family.
  
 0.746
aldh1a2
Retinal dehydrogenase 2-like; Belongs to the aldehyde dehydrogenase family.
  
 0.746
LOC106609867
Lecithin retinol acyltransferase-like.
    
 0.745
CYP26A1
Cytochrome P450 26A1-like; Belongs to the cytochrome P450 family.
   
 
 0.725
LOC106575940
Cytochrome P450 27C1 isoform X1; Belongs to the cytochrome P450 family.
   
 
 0.723
LOC106607466
Putative all-trans-retinol 13,14-reductase.
  
 
 0.703
LOC106600793
Putative all-trans-retinol 13,14-reductase.
  
 
 0.703
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.