STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608834Sal-like protein 4. (1190 aa)    
Predicted Functional Partners:
LOC106567644
Brain-specific homeobox protein homolog.
   
 0.579
LOC106603680
Brain-specific homeobox protein homolog.
   
 0.579
rbbp4
Histone-binding protein RBBP4.
    
  0.480
LOC106581094
Histone-binding protein RBBP4-like.
    
  0.480
LOC106603095
WD repeat-containing protein 73-like.
    
  0.480
LOC106597495
Histone-binding protein RBBP7-like.
    
  0.480
ENSSSAP00000027640
annotation not available
    
  0.480
LOC106570721
Histone-binding protein RBBP4-like.
    
  0.480
RBBP7
Histone-binding protein RBBP7 isoform X2.
    
  0.480
rbbp7
Salmo salar Histone-binding protein RBBP7 (rbbp7), mRNA.
    
  0.480
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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