ENSSSAP00000011751 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSSAP00000011751

annotation not available (125 aa)

Predicted Functional Partners:

LOC100194642

0.724

LOC100194662

0.724

LOC106565518

0.724

Mlec

0.665

LOC100194663

0.665

myl6b

0.617

LOC106583240

0.617

LOC106567035

0.617

ENSSSAP00000027857

0.606

ENSSSAP00000059808

0.606

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000011751	ENSSSAP00000027857	ENSSSAP00000011751	ENSSSAP00000027857	annotation not available	annotation not available	0.606
ENSSSAP00000011751	ENSSSAP00000059808	ENSSSAP00000011751	ENSSSAP00000059808	annotation not available	annotation not available	0.606
ENSSSAP00000011751	LOC100194642	ENSSSAP00000011751	ENSSSAP00000048615	annotation not available	Myosin, light polypeptide 3-1.	0.724
ENSSSAP00000011751	LOC100194662	ENSSSAP00000011751	ENSSSAP00000068732	annotation not available	Myosin light chain 1-1.	0.724
ENSSSAP00000011751	LOC100194663	ENSSSAP00000011751	ENSSSAP00000102375	annotation not available	Myosin light chain 1-3.	0.665
ENSSSAP00000011751	LOC106565518	ENSSSAP00000011751	ENSSSAP00000080884	annotation not available	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.	0.724
ENSSSAP00000011751	LOC106567035	ENSSSAP00000011751	ENSSSAP00000085261	annotation not available	Myosin light polypeptide 6-like isoform X2.	0.617
ENSSSAP00000011751	LOC106583240	ENSSSAP00000011751	ENSSSAP00000056476	annotation not available	Myosin light polypeptide 6.	0.617
ENSSSAP00000011751	Mlec	ENSSSAP00000011751	ENSSSAP00000058935	annotation not available	Malectin.	0.665
ENSSSAP00000011751	myl6b	ENSSSAP00000011751	ENSSSAP00000012455	annotation not available	Salmo salar Myosin light polypeptide 6B (myl6b), mRNA.	0.617
ENSSSAP00000027857	ENSSSAP00000011751	ENSSSAP00000027857	ENSSSAP00000011751	annotation not available	annotation not available	0.606
ENSSSAP00000027857	LOC100194642	ENSSSAP00000027857	ENSSSAP00000048615	annotation not available	Myosin, light polypeptide 3-1.	0.697
ENSSSAP00000027857	LOC100194662	ENSSSAP00000027857	ENSSSAP00000068732	annotation not available	Myosin light chain 1-1.	0.697
ENSSSAP00000027857	LOC100194663	ENSSSAP00000027857	ENSSSAP00000102375	annotation not available	Myosin light chain 1-3.	0.853
ENSSSAP00000027857	LOC106565518	ENSSSAP00000027857	ENSSSAP00000080884	annotation not available	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.	0.697
ENSSSAP00000027857	LOC106567035	ENSSSAP00000027857	ENSSSAP00000085261	annotation not available	Myosin light polypeptide 6-like isoform X2.	0.498
ENSSSAP00000027857	LOC106583240	ENSSSAP00000027857	ENSSSAP00000056476	annotation not available	Myosin light polypeptide 6.	0.498
ENSSSAP00000027857	Mlec	ENSSSAP00000027857	ENSSSAP00000058935	annotation not available	Malectin.	0.853
ENSSSAP00000027857	myl6b	ENSSSAP00000027857	ENSSSAP00000012455	annotation not available	Salmo salar Myosin light polypeptide 6B (myl6b), mRNA.	0.498
ENSSSAP00000059808	ENSSSAP00000011751	ENSSSAP00000059808	ENSSSAP00000011751	annotation not available	annotation not available	0.606