STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000011757annotation not available (274 aa)    
Predicted Functional Partners:
LOC106605957
mutS protein homolog 5-like.
  
 0.991
LOC106593957
mutS protein homolog 5-like.
  
0.985
LOC106592399
mutS protein homolog 5-like isoform X1.
   
 0.983
pms1
PMS1 protein homolog 1 isoform X2.
 
 0.973
mlh1
DNA mismatch repair protein Mlh1.
 
 0.967
pms2
Mismatch repair endonuclease PMS2 isoform X1.
 
 0.965
mlh3
DNA mismatch repair protein Mlh3 isoform X2.
  
 0.954
ENSSSAP00000001213
annotation not available
  
 0.953
ENSSSAP00000042990
annotation not available
   
 
 0.929
exo1
Exonuclease 1.
   
 0.886
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.