STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sp7Transcription factor Sp7. (457 aa)    
Predicted Functional Partners:
catk
Cathepsin K precursor; Belongs to the peptidase C1 family.
    
 
 0.683
P3h1
Procollagen-proline 3-dioxygenase 1.
    
 
 0.669
P3H1
Prolyl 3-hydroxylase 1-like.
    
 
 0.669
entpd5
Ectonucleoside triphosphate diphosphohydrolase 5/6.
      
 0.655
LOC106581097
Friend leukemia integration 1 transcription factor-like isoform X1.
     
 0.644
LOC106612965
Friend leukemia integration 1 transcription factor-like isoform X3.
     
 0.644
LOC106589632
Collagen alpha-1(I) chain-like.
    
 0.644
LOC106579847
Metalloendopeptidase.
      
 0.606
LOC106585594
Metalloendopeptidase.
      
 0.606
LOC106588754
Cartilage-associated protein-like.
    
 
 0.547
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.