STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf518bZinc finger protein 518B isoform X1. (761 aa)    
Predicted Functional Partners:
WDR1
WD repeat-containing protein 1-like.
      
 0.596
LOC106583413
WD repeat-containing protein 1-like isoform X1.
      
 0.596
LOC106568636
Mammalian ependymin-related protein 1-like.
      
 0.595
LOC106570707
Uncharacterized protein LOC106570707.
    
 0.595
gnpnat1
Glucosamine 6-phosphate N-acetyltransferase.
    
 
 0.567
ENSSSAP00000101267
annotation not available
    
 
 0.567
cssa10h11orf74
C11orf74 homolog.
      
 0.497
hltf
Helicase-like transcription factor.
   
 0.473
LOC106603779
General transcription factor II-I repeat domain-containing protein 1-like isoform X1.
    
 
 0.467
LOC106567554
General transcription factor II-I repeat domain-containing protein 1-like isoform X2.
    
 
 0.467
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.