STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plin2Perilipin; Belongs to the perilipin family. (433 aa)    
Predicted Functional Partners:
plin1
Perilipin-1 isoform X1.
     
0.901
LOC100380740
Perilipin; Belongs to the perilipin family.
  
  
 
0.901
vamp3
Vesicle-associated membrane protein 3.
   
 0.676
LOC106571395
Cation-independent mannose-6-phosphate receptor-like isoform X1.
   
 0.653
LOC106607799
Cation-independent mannose-6-phosphate receptor-like.
   
 0.653
LOC106565190
Rho-related BTB domain-containing protein 3-like isoform X2.
    
 0.626
LOC106583418
Rho-related BTB domain-containing protein 3-like.
    
 0.626
mprd
Cation-dependent mannose-6-phosphate receptor precursor.
   
 0.599
LOC106576801
Cation-dependent mannose-6-phosphate receptor-like.
   
 0.599
LOC106562310
AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]
    
  0.597
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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